Difference between revisions of "SynBioControl2017"
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− | == International Workshop on Control Engineering and Synthetic Biology == | + | == International Workshop== |
− | <h4> What | + | ==on Control Engineering and Synthetic Biology == |
+ | <h4> What next? </h4> | ||
</center> | </center> | ||
---- | ---- | ||
− | + | <center> | |
+ | [[File:GroupPhoto.jpg|900px]] | ||
+ | </center> | ||
− | ''' | + | An '''International Workshop on Control Engineering and Synthetic Biology''' will be held on the 17th and 18th July 2017 at the [http://www.princephiliphouse.com/ '''Royal Academy of Engineering - Prince Philip House'''], 3 Carlton House Terrace, SW1Y 5DG, London. This event is '''supported by the Engineering and Physical Sciences Research Council''' ([http://www.epsrc.ac.uk EPSRC]), under projects [http://gow.epsrc.ac.uk/NGBOViewGrant.aspx?GrantRef=EP/M002187/1 EP/M002187/1] and [http://gow.epsrc.ac.uk/NGBOViewGrant.aspx?GrantRef=EP/M002454/1 EP/M002454/1]. |
+ | |||
+ | '''Organisers:''' Guy-Bart Stan (Imperial College London), Antonis Papachristodoulou (University of Oxford), Filippo Menolascina (University of Edinburgh). | ||
<center> | <center> | ||
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</center> | </center> | ||
---- | ---- | ||
+ | |||
+ | == Delegate leaflet == | ||
+ | The delegate leaflet containing our welcoming message, programme of talks, poster abstracts, and travel information can be [http://sysos.eng.ox.ac.uk/wiki/images/2/2e/Delegate_Leaflet.pdf downloaded here]. | ||
+ | |||
+ | ==Twitter== | ||
+ | If you use Twitter, please label your tweets with the hashtag '''#synbiocontrol2017''' for easy searching and sorting. | ||
== Description == | == Description == | ||
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*[http://yvchen.bol.ucla.edu/ Professor Yvonne Chen], UCLA | *[http://yvchen.bol.ucla.edu/ Professor Yvonne Chen], UCLA | ||
− | *[https:// | + | *[https://team.inria.fr/ibis/hidde-de-jong/ Professor Hidde de Jong], INRIA |
− | *[https:// | + | *[https://sites.google.com/site/dibernardogroup/ Professor Mario di Bernardo], University of Bristol and University of Naples. [http://sysos.eng.ox.ac.uk/wiki/images/f/f7/Synbio_multicellular_control_dibernardo.pdf Slides] |
*[http://elsamadlab.ucsf.edu/ Professor Hana El Samad], UCSF | *[http://elsamadlab.ucsf.edu/ Professor Hana El Samad], UCSF | ||
+ | |||
+ | *[http://www.cambridgeconsultants.com/ Dr. Richard Hammond], Cambridge Consultants. [http://sysos.eng.ox.ac.uk/wiki/images/a/ae/P1789-P-153_v0.3.pdf Slides] | ||
*[http://biodynamics.ucsd.edu/profiles/jeff Professor Jeff Hasty], UCSD | *[http://biodynamics.ucsd.edu/profiles/jeff Professor Jeff Hasty], UCSD | ||
− | + | *[https://uwaterloo.ca/centre-for-theoretical-neuroscience/people-profiles/brian-ingalls Professor Brian Ingalls], University of Waterloo.[http://sysos.eng.ox.ac.uk/wiki/images/b/b0/2017_Ingalls.pdf Slides] | |
− | |||
− | *[https://uwaterloo.ca/centre-for-theoretical-neuroscience/people-profiles/brian-ingalls Professor Brian Ingalls], University of Waterloo | ||
*[http://www.bsse.ethz.ch/ctsb/people/people_PI/khammash Professor Mustafa Khammash], ETHZ | *[http://www.bsse.ethz.ch/ctsb/people/people_PI/khammash Professor Mustafa Khammash], ETHZ | ||
− | *[http://www.cds.caltech.edu/~murray Professor Richard Murray], Caltech | + | *[http://www.cds.caltech.edu/~murray Professor Richard Murray], Caltech. [http://sysos.eng.ox.ac.uk/wiki/images/7/78/Murray-recombinases_london-18Jul17.pdf Slides] |
− | *[https://www.microsoft.com/en-us/research/people/aphillip/ Dr Andrew Phillips], Microsoft Research | + | *[https://www.microsoft.com/en-us/research/people/aphillip/ Dr Andrew Phillips], Microsoft Research [http://sysos.eng.ox.ac.uk/wiki/images/3/3b/APhillips_SynBioControl2017.pdf Slides] |
*[http://www.synpromics.com/about-us/our-team/michael-l-roberts-phd Michael Roberts], Synpromics | *[http://www.synpromics.com/about-us/our-team/michael-l-roberts-phd Michael Roberts], Synpromics | ||
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*[http://researcher.watson.ibm.com/researcher/view.php?person=ie-GRusso Dr. Giovanni Russo], IBM Research | *[http://researcher.watson.ibm.com/researcher/view.php?person=ie-GRusso Dr. Giovanni Russo], IBM Research | ||
− | *[https://www.researchgate.net/profile/Velia_Siciliano Dr. Velia Siciliano], Imperial College London | + | *[https://www.researchgate.net/profile/Velia_Siciliano Dr. Velia Siciliano], Imperial College London. [https://drive.google.com/file/d/0B2H3R1gWZYg0aGlEQ2dNMlRKelk/view?usp=sharing Slide] |
− | *[http://swainlab.bio.ed.ac.uk/ Professor Peter Swain], University of Edinburgh | + | *[http://swainlab.bio.ed.ac.uk/ Professor Peter Swain], University of Edinburgh. [https://elifesciences.org/articles/21415 Paper] |
---- | ---- | ||
== Workshop schedule == | == Workshop schedule == | ||
− | |||
{| class="wikitable" | {| class="wikitable" | ||
! | ! | ||
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| style="text-align: center;" | '''Mustafa Khammash''' | | style="text-align: center;" | '''Mustafa Khammash''' | ||
<br> | <br> | ||
− | ''Theory and | + | ''Theory and methods for biomolecular control systems'' |
| colspan="3" style="text-align: center;" | | | colspan="3" style="text-align: center;" | | ||
'''Richard Murray'''<br> | '''Richard Murray'''<br> | ||
<br> | <br> | ||
− | ''Recombinase- | + | ''Recombinase-based circuits''<br> |
− | '' | + | ''for environmental detection diagnostics, and logging'' |
|- | |- | ||
| 9:45 AM - 10:30 AM | | 9:45 AM - 10:30 AM | ||
Line 95: | Line 105: | ||
'''Mario di Bernardo'''<br> | '''Mario di Bernardo'''<br> | ||
<br> | <br> | ||
− | ''Design, | + | ''Design, implementation and in-silico analysis ''<br> |
− | ''of | + | ''of multi-cellular feedback control strategies'' <br> |
− | ''in | + | ''in synthetic bacterial consortia'' |
| colspan="3" style="text-align: center;" | ''' Hana El Samad '''<br> | | colspan="3" style="text-align: center;" | ''' Hana El Samad '''<br> | ||
<br> | <br> | ||
− | '' | + | ''Real-time optogenetic compensation strategies''<br> |
+ | ''to operationally investigate feedback regulation'' | ||
|- | |- | ||
| 10:30 AM - 11 AM | | 10:30 AM - 11 AM | ||
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| style="text-align: center;" | '''Michael Roberts''' <br> | | style="text-align: center;" | '''Michael Roberts''' <br> | ||
<br> | <br> | ||
− | ''Precision in | + | ''Precision in gene regulation using synthetic promoters'' |
| colspan="3" style="text-align: center;" | '''Velia Siciliano''' <br> | | colspan="3" style="text-align: center;" | '''Velia Siciliano''' <br> | ||
<br> | <br> | ||
− | ''The | + | ''The second wave of mammalian synthetic biology:''<br> |
− | '' | + | ''engineering safer synthetic devices''<br> |
|- | |- | ||
| 11:45 AM - 12:30 PM | | 11:45 AM - 12:30 PM | ||
| style="text-align: center;" | '''Richard Hammond''' <br> | | style="text-align: center;" | '''Richard Hammond''' <br> | ||
<br> | <br> | ||
− | ''Finding | + | ''Finding needles in haystacks: a high-throughput ''<br> |
− | '' | + | ''platform for genetic constructs screening'' |
| colspan="3" style="text-align: center;" | '''Yvonne Chen''' <br> | | colspan="3" style="text-align: center;" | '''Yvonne Chen''' <br> | ||
<br> | <br> | ||
− | ''Engineering | + | ''Engineering next-generation T cells''<br> |
− | ''for | + | ''for cancer immunotherapy'' |
|- | |- | ||
| 12:30 PM - 2 PM | | 12:30 PM - 2 PM | ||
− | | style="text-align: center;" | Lunch / Poster | + | | style="text-align: center;" | Lunch / Poster session |
− | | colspan="3" style="text-align: center;" | Lunch / Poster | + | | colspan="3" style="text-align: center;" | Lunch / Poster session |
|- | |- | ||
| 2 PM - 2:45 PM | | 2 PM - 2:45 PM | ||
| style="text-align: center;" | '''Peter Swain''' <br> | | style="text-align: center;" | '''Peter Swain''' <br> | ||
<br> | <br> | ||
− | ''Distributing | + | ''Distributing tasks via multiple input pathways''<br> |
− | '' | + | ''increases survival in stress'' |
| colspan="3" style="text-align: center;" | '''Andrew Phillips''' <br> | | colspan="3" style="text-align: center;" | '''Andrew Phillips''' <br> | ||
<br> | <br> | ||
− | ''Programming | + | ''Programming languages for molecular and genetic devices''<br> |
|- | |- | ||
| 2:45 PM - 3:30 PM | | 2:45 PM - 3:30 PM | ||
| style="text-align: center;" | '''Hidde de Jong''' <br> | | style="text-align: center;" | '''Hidde de Jong''' <br> | ||
<br> | <br> | ||
− | ''Natural and | + | ''Natural and synthetic control''<br> |
− | '' | + | '' of resource allocation in bacteria'' |
| colspan="3" style="text-align: center;" | '''Giovanni Russo''' <br> | | colspan="3" style="text-align: center;" | '''Giovanni Russo''' <br> | ||
<br> | <br> | ||
− | ''How to | + | ''How to synchronize and de-synchronize biochemical circuits'' |
− | |||
|- | |- | ||
− | | 3 PM - 4:15 PM | + | | 3:30 PM - 4:15 PM |
− | | style="text-align: center;" | Coffee | + | | style="text-align: center;" | Coffee break / Poster session |
− | | colspan="3" | Coffee | + | | colspan="3" style="text-align: center;" | Coffee break / Poster session |
|- | |- | ||
|4:15 PM - 5 PM | |4:15 PM - 5 PM | ||
| style="text-align: center;" | '''Brian Ingalls''' <br> | | style="text-align: center;" | '''Brian Ingalls''' <br> | ||
<br> | <br> | ||
− | ''Synthetic | + | ''Synthetic biology approaches to suppression of antibiotic resistance:''<br> |
− | '' | + | ''toward model-based design''<br> |
| colspan="3" style="text-align: center;" | '''Francesca Ceroni''' <br> | | colspan="3" style="text-align: center;" | '''Francesca Ceroni''' <br> | ||
<br> | <br> | ||
− | ''Characterisation of | + | ''Characterisation of host-construct interactions''<br> |
− | '' | + | ''for synthetic biology''<br> |
|- | |- | ||
| 5 PM - 5:45 PM | | 5 PM - 5:45 PM | ||
− | | style="text-align: center;" | | + | | style="text-align: center;" | Poster session (5-6 PM) |
| colspan="3" style="text-align: center;" | '''Jeff Hasty''' <br> | | colspan="3" style="text-align: center;" | '''Jeff Hasty''' <br> | ||
<br> | <br> | ||
− | ''Engineered | + | ''Engineered gene circuits: from clocks to synchronized delivery''<br> |
− | |||
|- | |- | ||
| 6 PM - 7 PM | | 6 PM - 7 PM | ||
− | | style="text-align: center;" | | + | | style="text-align: center;" | Networking / Free time |
| colspan="3" style="text-align: center;" | Final remarks<br> | | colspan="3" style="text-align: center;" | Final remarks<br> | ||
<br> | <br> | ||
− | ''Where | + | ''Where do we go from here?'' |
|- | |- | ||
|7 PM-10 PM | |7 PM-10 PM | ||
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== Location of the Workshop == | == Location of the Workshop == | ||
− | Prince Philip House at 3 Carlton House Terrace is an historic Grade I listed building, overlooking The Mall and St James’s Park and a short walk from Trafalgar Square. | + | Prince Philip House at 3 Carlton House Terrace is an historic Grade I listed building, overlooking The Mall and St James’s Park and a short walk from Trafalgar Square. The corresponding postcode is SW1Y 5DG. |
==Accommodation for Attendees == | ==Accommodation for Attendees == | ||
Line 199: | Line 208: | ||
If you have any further queries, please contact Nazib Ahmed: n.ahmed@imperial.ac.uk | If you have any further queries, please contact Nazib Ahmed: n.ahmed@imperial.ac.uk | ||
− | |||
== Travel Information == | == Travel Information == | ||
− | The venue is close to several bus and tube stops and there are plenty of hotels nearby or a few stops away. | + | The venue is close to several bus and tube stops and there are plenty of hotels nearby or a few stops away. Please see our [http://sysos.eng.ox.ac.uk/wiki/images/2/2e/Delegate_Leaflet.pdf delegate leaflet] for travel information and nearest tube stations. |
== Posters == | == Posters == | ||
Everyone participating in the workshop is invited to bring a poster to display their work. | Everyone participating in the workshop is invited to bring a poster to display their work. |
Latest revision as of 12:07, 21 August 2019
International Workshop
on Control Engineering and Synthetic Biology
What next?
An International Workshop on Control Engineering and Synthetic Biology will be held on the 17th and 18th July 2017 at the Royal Academy of Engineering - Prince Philip House, 3 Carlton House Terrace, SW1Y 5DG, London. This event is supported by the Engineering and Physical Sciences Research Council (EPSRC), under projects EP/M002187/1 and EP/M002454/1.
Organisers: Guy-Bart Stan (Imperial College London), Antonis Papachristodoulou (University of Oxford), Filippo Menolascina (University of Edinburgh).
Delegate leaflet
The delegate leaflet containing our welcoming message, programme of talks, poster abstracts, and travel information can be downloaded here.
If you use Twitter, please label your tweets with the hashtag #synbiocontrol2017 for easy searching and sorting.
Description
Designing and implementing effective feedback control in living cells has the potential to dramatically change biotechnology. However, before this potential is realised, a number of theoretical and practical challenges must be addressed, which lie at the interface between control engineering and synthetic biology. This workshop will discuss both the challenges and the opportunities that Synthetic Biology offers. A specific focus will be on the “next grand challenges” the field of synthetic biology and how control engineering can address them. An exceptional group of speakers, world leaders in synthetic biology and control engineering, will present recent progress, identify challenges and share their vision of where synthetic biology is headed and how the control engineering community can contribute to delivering its promise.
- Control Engineering Themes:
Modelling, analysis, and design of reliable synthetic circuits as well as regulation of synthetic processes.
- Synthetic Biology Themes:
Challenges and opportunities for implementing designs and enabling effective synthetic regulation and control.
Registration
Registration is now closed - contact us if you have any queries.
Confirmed Speakers
- Francesca Ceroni, Imperial College London
- Professor Yvonne Chen, UCLA
- Professor Hidde de Jong, INRIA
- Professor Mario di Bernardo, University of Bristol and University of Naples. Slides
- Professor Hana El Samad, UCSF
- Dr. Richard Hammond, Cambridge Consultants. Slides
- Professor Jeff Hasty, UCSD
- Professor Brian Ingalls, University of Waterloo.Slides
- Professor Richard Murray, Caltech. Slides
- Dr Andrew Phillips, Microsoft Research Slides
- Michael Roberts, Synpromics
- Dr. Giovanni Russo, IBM Research
- Dr. Velia Siciliano, Imperial College London. Slide
- Professor Peter Swain, University of Edinburgh. Paper
Workshop schedule
17 July | 18 July | |||||
---|---|---|---|---|---|---|
8.30 AM | Coffee | Coffee | ||||
8.50 AM | Introduction | |||||
9 AM - 9:45 AM | Mustafa Khammash
|
Richard Murray | ||||
9:45 AM - 10:30 AM |
Mario di Bernardo |
Hana El Samad
| ||||
10:30 AM - 11 AM | Coffee Break | Coffee Break | ||||
11 AM -11:45 AM | Michael Roberts
|
Velia Siciliano
| ||||
11:45 AM - 12:30 PM | Richard Hammond
|
Yvonne Chen
| ||||
12:30 PM - 2 PM | Lunch / Poster session | Lunch / Poster session | ||||
2 PM - 2:45 PM | Peter Swain
|
Andrew Phillips
| ||||
2:45 PM - 3:30 PM | Hidde de Jong
|
Giovanni Russo
| ||||
3:30 PM - 4:15 PM | Coffee break / Poster session | Coffee break / Poster session | ||||
4:15 PM - 5 PM | Brian Ingalls
|
Francesca Ceroni
| ||||
5 PM - 5:45 PM | Poster session (5-6 PM) | Jeff Hasty
| ||||
6 PM - 7 PM | Networking / Free time | Final remarks
| ||||
7 PM-10 PM | Dinner for the speakers |
Location of the Workshop
Prince Philip House at 3 Carlton House Terrace is an historic Grade I listed building, overlooking The Mall and St James’s Park and a short walk from Trafalgar Square. The corresponding postcode is SW1Y 5DG.
Accommodation for Attendees
As an attendee, you can locate and book accommodation directly via this link.
An array of hotel/accommodation venues are available upon search. Most venues fall within reach of a local underground station from which you can board the Piccadilly Line to reach the venue. Alternatively travel by taxi is feasible. Note: Bookings and availabilities are dealt with on a first-come first-served basis. It is recommended to book your accommodation in as advance as possible.
For enquiries solely and specifically on bookings/availabilities only, you can contact:
Email: vacenquiries@imperial.ac.uk
Telephone: +44 (0)20 7594 9507
If you have any further queries, please contact Nazib Ahmed: n.ahmed@imperial.ac.uk
Travel Information
The venue is close to several bus and tube stops and there are plenty of hotels nearby or a few stops away. Please see our delegate leaflet for travel information and nearest tube stations.
Posters
Everyone participating in the workshop is invited to bring a poster to display their work.